Here is what I ended up getting after the guys at Zipper's tweaked my parts list.
Zippers Muscle 107" Kit for 2007-Up Big Twin Cable-Throttle Models, Silver +$3,449.00
Baker GrudgeBox $3,395.00
Baker Sleeper trap door $250.00
Baker Compensator $499.00
Baker Primary Chain Tension Adjuster $249.00
Zipper's Variable Pressure Clutch $306.95
Horsepower Inc. 58mm/1.730 Throttle Body $799.95
S&S TC/00+XL Lifters $146.95
Chrome '95-'08 Touring D&D Fat Cat, Straight-Cut, Wrapped Big Bore Baffle +$999.00
S&S Balanced Wheels 4 3/8 stroke with Full-Width Rod Tops for 2007-Up 'A' Twin Cam® Engines +$1,517.95
Zippers Blueprinted Billet Cam Plate for '99-'06 TC Engines +$419.95
SE 2007-up oil pump assembly +$149.95
Jagg oil cooler $329.95
A lot of new gaskets, sprockets, chains, brake rotors, windshield, etc.
Total build cost to date, labor included $15,446.74